Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792237.1_cds_XP_016511371.1_2337
CDS Infomation

[gene=LOC107828537] [db_xref=GeneID:107828537] [protein=zinc finger CCCH domain-containing protein 41-like] [protein_id=XP_016511371.1] [location=complement(join(4443..4823,5349..5699,6298..7452,7551..8285))] [gbkey=CDS]
Sequence

ATGGAGCTTAAAGTTTCATCTCCAAAGCTGGTATTTTCAACTTCTGATTGCAATAGTGAT
CCCGAGGAGAAAGAAATTAGTGAAGATGATGATGATGATCGTAATCATAAACATCGTAGA
AAGGATACACGTTCACAATCTACAGAGACAGAAGCTCTTGACCCAGCTTTAAGGAGACCA
TTCAGGAAACGGAACAAGCCGTTTGAAAATGGACATCCTTACCAGGAAGGAGATTCTCAC
TCGAGTGATACTAGGTTTGGGAAAAGACGAGGAATGGGTTCTTTTTCCAGGACACCTTCA
GATTCATATCAGATGATGAGGCTAAATCAGTCCCTGTCTGGTCATGCTGGTCCTGGTAGG
GGTCGAGGAAGAGAATCTGGTGCTTGGGGTCCGTGTGAATCTAGGTTCAGCACTATTGAT
ATTGCGTCTCAATTTGTTCCACAAGGCCCTATTAATCCTCTTCTTTATACTGGAAGGGGG
CCGCAAAATGTTTCCAGTGGACAGGGTGCGCCTTGGAATGCGTTTGGAATAGTTCCAGCA
ATACCTAATGGTGGTCTTGATACACTTCATACCCTTGGTTTACAGGGAACGCTTAGAACG
TCCTTGAATCCTGCCATGACTATGGGCATTCCAAGGCAAAGGTGTAGAGACTTTGAGGAG
CGTGGTTTTTGCCTAAGAGGAGATATGTGCCCTCTGGAGCATGGAGTAAATCGCATCGTT
GTTGAAGATGTTCAGAGCCTTTCTAAGTTTAATCTTCCTGTTTCACTTCCCGGTGCTCAT
ATGGTGGGACCAGCTACTGCACAAGGATCTTTACCTGCAATAGGCCCCTCAAGCTCATTG
GCTAATAAAGCTTTACATAACAAAAGTATCAACCCTCCAGTGATTGATAATGGATTAGGT
TTGACTGATACTTTTGGTGGTGGTTCTGTGGCTGGGGGAGCTGATTTCTATGATCCTGAT
CAGCCTCTATGGTCAAATGATCATCCTGAAAATTCAGCAGCACTTGTGGATGTAAATCGG
TCTAAAATTGATGATACAGGGCCGATGCTGGATGCAGACTCCTCTGATCAGGATCAGGTT
GCGGTTTGTGATGGCTTTAAACTTGAGCGTCTAGATAGAGATGCTGGAGCAGCTTCAGGA
TCTCAAAGTGTGTGGGAAAGAACCAGTAGGTCTAAACATAAGTTGCAATCATTCAACAGC
ACTCAGGGTGTAAACCGTCATGGTAAGCAAACAAATGTAGATACCATAGACCCGCAAATG
ATGGAATCATCTTCAGAGCCCCAAAGTAGTTCTGGACTCAATATGCGAAAACCATCTCAA
AAGGCACTCCGTACTCTATTTGTAAGTGGGATTCCGCAGAAAGACAACAAACCAGAAGCT
CTTCTTTCACATTTTCAAAAATTCGGGGAGGTTATCGACATTTACATCCCGATGAATGGT
GAACGAGCTTTTGTTCAATTTTCTAAGAGGGAAGAAGCTGAGGCTGCTTTAAAAGCACCA
GATGCTGTGATGGGCAACCGCTTTATAAAGCTTTTCTGGGCAAACAGGGATAGCATTATG
GATAATGGAGCAAGTGGTCCTAGTAATTTTCCATTAGCTCCCCGCGGTGGGACACCCAGT
ACGGTTCCACCCCATCTATTGGTTCCTCATAAAAGGAAAGACAATCTGCAGACTGTAGCC
CGAAAAACTGCTGAACATGGTATTGTTGCTCCGTTAGCCACCTCTGATCTGCCCAAGCCT
GTGGCTCAGAATGGTCTCAAAACTACACCACCTTTGAAGAGAAAACTGGAAACTTTAGAA
CTTCTGAAGGAAGAAATGCGCAAGAAGCAGGAGATGCTTGAGCAAAAGCGTAATGAGTTC
CGACGCAAGTTGGATAAACTTGAGAAGCAAGCTGTGGGTGTGAAAGATGAAGCAGCGCCA
GATCAGGCTATGAACAAACCAAAGGGAGGAGGAACAGTTTCCAACTCTGGTAAAGTGGAA
AATTCAAGTCCCGTAGAACCTAGTAACACTGTGTCATCACCACCATCTGAAGCAACACCA
GATAGTAGATCTACAGAGAATGCCGAACGCACTTGTTCAAAATCATCTTCGACTGTTGCA
CCGCGTGAAGCTTCGAACTTGAAGCAGTCAATTCGTCCATTGGCACCGGTGGGCGCACCT
TTTATCTCAAATAGATACAAACTAGATAACCGGCCCACCGCATTCAAGATCCTTCCACCT
CTACCAAGTGCTCTGGCAAACGTTGACGTCCTGAAGGAGCACTTTTCTACTTTTGGTGAT
CCTCCTTCTGTTGAGCTGGAGGATTTGGAACCTCAAGATTGTAATAATGGCTCAGAGGTG
CAAAATACATCTGCTAGAATATCTTTCCGATCACGTCGTTCTGCTGAAAGAGCATTTCTG
AATGGTAAATCCTGGCAAGGCCAAATTCTGCAGCTTATGTGGGTGCAATCCAGTAATCCT
GCAAAGGATGTTGGTGTTGGAGAAAATGTTACTCCAGCTTCAAAGCAGCCTTCAGATGCT
AATGGGCAATCCAATGCAAAAAATGGCGTGGTTGGTGTACCGGAAGGAAGTGTGGCAGGG
AACCATGAACCTGACAATCAAGGAAGAAGAGAAGATGAATGA

Peptide Sequence

PEP ID

XP_016511371.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 41-like [Nicotiana tabacum]
Sequence

MELKVSSPKLVFSTSDCNSDPEEKEISEDDDDDRNHKHRRKDTRSQSTETEALDPALRRP
FRKRNKPFENGHPYQEGDSHSSDTRFGKRRGMGSFSRTPSDSYQMMRLNQSLSGHAGPGR
GRGRESGAWGPCESRFSTIDIASQFVPQGPINPLLYTGRGPQNVSSGQGAPWNAFGIVPA
IPNGGLDTLHTLGLQGTLRTSLNPAMTMGIPRQRCRDFEERGFCLRGDMCPLEHGVNRIV
VEDVQSLSKFNLPVSLPGAHMVGPATAQGSLPAIGPSSSLANKALHNKSINPPVIDNGLG
LTDTFGGGSVAGGADFYDPDQPLWSNDHPENSAALVDVNRSKIDDTGPMLDADSSDQDQV
AVCDGFKLERLDRDAGAASGSQSVWERTSRSKHKLQSFNSTQGVNRHGKQTNVDTIDPQM
MESSSEPQSSSGLNMRKPSQKALRTLFVSGIPQKDNKPEALLSHFQKFGEVIDIYIPMNG
ERAFVQFSKREEAEAALKAPDAVMGNRFIKLFWANRDSIMDNGASGPSNFPLAPRGGTPS
TVPPHLLVPHKRKDNLQTVARKTAEHGIVAPLATSDLPKPVAQNGLKTTPPLKRKLETLE
LLKEEMRKKQEMLEQKRNEFRRKLDKLEKQAVGVKDEAAPDQAMNKPKGGGTVSNSGKVE
NSSPVEPSNTVSSPPSEATPDSRSTENAERTCSKSSSTVAPREASNLKQSIRPLAPVGAP
FISNRYKLDNRPTAFKILPPLPSALANVDVLKEHFSTFGDPPSVELEDLEPQDCNNGSEV
QNTSARISFRSRRSAERAFLNGKSWQGQILQLMWVQSSNPAKDVGVGENVTPASKQPSDA
NGQSNAKNGVVGVPEGSVAGNHEPDNQGRREDE

Transcript Sequence

Gene sequence data has not been registered.